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fmri vs. fmri_seg
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(venv_sct) ~/data/forum_fmri-t1-coreg-translation/sub/sub git:[dot]
(venv_sct) ~/data/forum_fmri-t1-coreg-translation/sub/sub git:[dot]
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sct_image -header -i fmri_spinal_moco_mean
.nii.gz
sct_image -header -i fmri_spinal_moco_mean
_seg
.nii.gz
--
--
Spinal Cord Toolbox (git-jn/debug-warp-concat-issues-7af12e107e14e5a4bc5b2dd7b09d2d87cc448a30)
Spinal Cord Toolbox (git-jn/debug-warp-concat-issues-7af12e107e14e5a4bc5b2dd7b09d2d87cc448a30)
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sct_image -header -i fmri_spinal_moco_mean
.nii.gz
sct_image -header -i fmri_spinal_moco_mean
_seg
.nii.gz
--
--
sizeof_hdr 348
sizeof_hdr 348
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data_type
FLOAT64
data_type
UINT8
dim [3, 128, 128, 31, 1, 1, 1, 1]
dim [3, 128, 128, 31, 1, 1, 1, 1]
vox_units mm
vox_units mm
time_units s
time_units s
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datatype
64
datatype
2
nbyper
8
nbyper
1
bitpix
64
bitpix
8
pixdim [-1.0, 1.5, 1.5, 4.0, 1.0, 1.0, 1.0, 1.0]
pixdim [-1.0, 1.5, 1.5, 4.0, 1.0, 1.0, 1.0, 1.0]
vox_offset 352
vox_offset 352
cal_max 0.000000
cal_max 0.000000
cal_min 0.000000
cal_min 0.000000
scl_slope 1.000000
scl_slope 1.000000
scl_inter 0.000000
scl_inter 0.000000
phase_dim 0
phase_dim 0
freq_dim 0
freq_dim 0
slice_dim 0
slice_dim 0
slice_name Unknown
slice_name Unknown
slice_code 0
slice_code 0
slice_start 0
slice_start 0
slice_end 0
slice_end 0
slice_duration 0.000000
slice_duration 0.000000
toffset 0.000000
toffset 0.000000
intent Unknown
intent Unknown
intent_code 0
intent_code 0
intent_name
intent_name
intent_p1 0.000000
intent_p1 0.000000
intent_p2 0.000000
intent_p2 0.000000
intent_p3 0.000000
intent_p3 0.000000
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qform_name
Scanner
Anat
qform_name
Aligned
Anat
qform_code
1
qform_code
2
qto_xyz:1 -1.499949 -0.000000 -0.033059 95.923622
qto_xyz:1 -1.499949 -0.000000 -0.033059 95.923622
qto_xyz:2 -0.000036 1.499994 0.011637 -96.802467
qto_xyz:2 -0.000036 1.499994 0.011637 -96.802467
qto_xyz:3 -0.012397 -0.004364 3.999846 -146.741440
qto_xyz:3 -0.012397 -0.004364 3.999846 -146.741440
qto_xyz:4 0.000000 0.000000 0.000000 1.000000
qto_xyz:4 0.000000 0.000000 0.000000 1.000000
qform_xorient Right-to-Left
qform_xorient Right-to-Left
qform_yorient Posterior-to-Anterior
qform_yorient Posterior-to-Anterior
qform_zorient Inferior-to-Superior
qform_zorient Inferior-to-Superior
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sform_name
Scanner
Anat
sform_name
Aligned
Anat
sform_code
1
sform_code
2
sto_xyz:1 -1.499949 -0.000000 -0.033040 95.923622
sto_xyz:1 -1.499949 -0.000000 -0.033040 95.923622
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sto_xyz:2 -0.000036 1.499994 0.011637 -
96.8
02467
sto_xyz:2 -0.000036 1.499994 0.011637 -
89.3
02467
sto_xyz:3 -0.012390 -0.004364 3.999847 -146.741440
sto_xyz:3 -0.012390 -0.004364 3.999847 -146.741440
sto_xyz:4 0.000000 0.000000 0.000000 1.000000
sto_xyz:4 0.000000 0.000000 0.000000 1.000000
sform_xorient Right-to-Left
sform_xorient Right-to-Left
sform_yorient Posterior-to-Anterior
sform_yorient Posterior-to-Anterior
sform_zorient Inferior-to-Superior
sform_zorient Inferior-to-Superior
file_type NIFTI-1+
file_type NIFTI-1+
file_code 1
file_code 1
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descrip
2203.12-dirty 2024-02-01T16:17:47+00:00
descrip
6.0.4:ddd0a010
aux_file
aux_file
Saved diffs
Original text
Open file
(venv_sct) ~/data/forum_fmri-t1-coreg-translation/sub/sub git:[dot] sct_image -header -i fmri_spinal_moco_mean.nii.gz -- Spinal Cord Toolbox (git-jn/debug-warp-concat-issues-7af12e107e14e5a4bc5b2dd7b09d2d87cc448a30) sct_image -header -i fmri_spinal_moco_mean.nii.gz -- sizeof_hdr 348 data_type FLOAT64 dim [3, 128, 128, 31, 1, 1, 1, 1] vox_units mm time_units s datatype 64 nbyper 8 bitpix 64 pixdim [-1.0, 1.5, 1.5, 4.0, 1.0, 1.0, 1.0, 1.0] vox_offset 352 cal_max 0.000000 cal_min 0.000000 scl_slope 1.000000 scl_inter 0.000000 phase_dim 0 freq_dim 0 slice_dim 0 slice_name Unknown slice_code 0 slice_start 0 slice_end 0 slice_duration 0.000000 toffset 0.000000 intent Unknown intent_code 0 intent_name intent_p1 0.000000 intent_p2 0.000000 intent_p3 0.000000 qform_name Scanner Anat qform_code 1 qto_xyz:1 -1.499949 -0.000000 -0.033059 95.923622 qto_xyz:2 -0.000036 1.499994 0.011637 -96.802467 qto_xyz:3 -0.012397 -0.004364 3.999846 -146.741440 qto_xyz:4 0.000000 0.000000 0.000000 1.000000 qform_xorient Right-to-Left qform_yorient Posterior-to-Anterior qform_zorient Inferior-to-Superior sform_name Scanner Anat sform_code 1 sto_xyz:1 -1.499949 -0.000000 -0.033040 95.923622 sto_xyz:2 -0.000036 1.499994 0.011637 -96.802467 sto_xyz:3 -0.012390 -0.004364 3.999847 -146.741440 sto_xyz:4 0.000000 0.000000 0.000000 1.000000 sform_xorient Right-to-Left sform_yorient Posterior-to-Anterior sform_zorient Inferior-to-Superior file_type NIFTI-1+ file_code 1 descrip 2203.12-dirty 2024-02-01T16:17:47+00:00 aux_file
Changed text
Open file
(venv_sct) ~/data/forum_fmri-t1-coreg-translation/sub/sub git:[dot] sct_image -header -i fmri_spinal_moco_mean_seg.nii.gz -- Spinal Cord Toolbox (git-jn/debug-warp-concat-issues-7af12e107e14e5a4bc5b2dd7b09d2d87cc448a30) sct_image -header -i fmri_spinal_moco_mean_seg.nii.gz -- sizeof_hdr 348 data_type UINT8 dim [3, 128, 128, 31, 1, 1, 1, 1] vox_units mm time_units s datatype 2 nbyper 1 bitpix 8 pixdim [-1.0, 1.5, 1.5, 4.0, 1.0, 1.0, 1.0, 1.0] vox_offset 352 cal_max 0.000000 cal_min 0.000000 scl_slope 1.000000 scl_inter 0.000000 phase_dim 0 freq_dim 0 slice_dim 0 slice_name Unknown slice_code 0 slice_start 0 slice_end 0 slice_duration 0.000000 toffset 0.000000 intent Unknown intent_code 0 intent_name intent_p1 0.000000 intent_p2 0.000000 intent_p3 0.000000 qform_name Aligned Anat qform_code 2 qto_xyz:1 -1.499949 -0.000000 -0.033059 95.923622 qto_xyz:2 -0.000036 1.499994 0.011637 -96.802467 qto_xyz:3 -0.012397 -0.004364 3.999846 -146.741440 qto_xyz:4 0.000000 0.000000 0.000000 1.000000 qform_xorient Right-to-Left qform_yorient Posterior-to-Anterior qform_zorient Inferior-to-Superior sform_name Aligned Anat sform_code 2 sto_xyz:1 -1.499949 -0.000000 -0.033040 95.923622 sto_xyz:2 -0.000036 1.499994 0.011637 -89.302467 sto_xyz:3 -0.012390 -0.004364 3.999847 -146.741440 sto_xyz:4 0.000000 0.000000 0.000000 1.000000 sform_xorient Right-to-Left sform_yorient Posterior-to-Anterior sform_zorient Inferior-to-Superior file_type NIFTI-1+ file_code 1 descrip 6.0.4:ddd0a010 aux_file
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